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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs2286989 chr7:76142872 A/G 3.09E-5 110 41.22 45.87 25.83 KM Plot
THYM rs2286990 chr7:76142930 C/T 3.09E-5 110 41.22 45.87 25.83 KM Plot
THYM rs2287783 chr16:24831727 C/T 4.32E-5 113 49.4 27.57 50.1 KM Plot
THYM rs2303084 chr16:24834581 G/C 5.0E-5 111 46.27 27.57 50.1 KM Plot
THYM rs2350629 chr22:45731050 A/G 4.77E-5 112 41.77 37.8 38.83 KM Plot
THYM rs2400543 chr8:82785974 G/T 4.72E-5 113 42.73 36.4 22.5 KM Plot
THYM rs2528284 chr7:76144156 A/G 3.38E-5 109 41.77 45.87 25.83 KM Plot
THYM rs2547040 chr16:24736408 G/C 5.26E-8 109 25.12 27.33 46.6 KM Plot
THYM rs28538438 chr7:76132397 A/G 2.57E-5 112 38.33 46.23 25.83 KM Plot
THYM rs28550264 chr1:245208619 G/A 1.41E-12 111 46.6 35.4 27.62 KM Plot
THYM rs28606985 chr8:144665680 C/A 0.000129 110 44.38 38.33 25.1 KM Plot
THYM rs2994669 chr1:45886349 C/T 3.49E-6 110 40.67 44.22 14.47 KM Plot
THYM rs3036695 chr8:82691019 CTT/C 7.04E-5 112 42.25 36.4 22.5 KM Plot
THYM rs3093027 chr6:167532371 T/G 3.03E-9 112 38.48 49.75 9.83 KM Plot
THYM rs3219479 chr1:45802143 C/G 2.38E-6 113 14.47 38.23 42.82 KM Plot